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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   atrioventricular septal defect
  

Disease ID 1254
Disease atrioventricular septal defect
Definition
A defect of the atrioventricular septum of the heart. [HPO:probinson, pmid:12632326]
Synonym
atrioventricular canal defect
avc defect
avcd
Orphanet
OMIM
DOID
ICD10
UMLS
C1389016
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:7)
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:1)
7446  |  AVSD1  |  CTD_human;OMIM
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:68)
51205  |  ACP6  |  3.377  |  DISEASES
491  |  ATP2B2  |  2.283  |  DISEASES
26053  |  AUTS2  |  2.424  |  DISEASES
54880  |  BCOR  |  1.564  |  DISEASES
22995  |  CEP152  |  3.17  |  DISEASES
9557  |  CHD1L  |  1.78  |  DISEASES
55636  |  CHD7  |  1.31  |  DISEASES
10370  |  CITED2  |  1.89  |  DISEASES
8218  |  CLTCL1  |  2.773  |  DISEASES
152330  |  CNTN4  |  2.291  |  DISEASES
1291  |  COL6A1  |  1.728  |  DISEASES
78987  |  CRELD1  |  6.138  |  DISEASES
79174  |  CRELD2  |  3.634  |  DISEASES
1399  |  CRKL  |  1.432  |  DISEASES
3491  |  CYR61  |  1.198  |  DISEASES
613211  |  DEFB134  |  4.035  |  DISEASES
613209  |  DEFB135  |  4.231  |  DISEASES
1717  |  DHCR7  |  2.844  |  DISEASES
8701  |  DNAH11  |  2.709  |  DISEASES
1826  |  DSCAM  |  2.313  |  DISEASES
1859  |  DYRK1A  |  1.263  |  DISEASES
1906  |  EDN1  |  1.175  |  DISEASES
10938  |  EHD1  |  1.492  |  DISEASES
79813  |  EHMT1  |  2.097  |  DISEASES
10919  |  EHMT2  |  1.684  |  DISEASES
3266  |  ERAS  |  2.248  |  DISEASES
132884  |  EVC2  |  3.318  |  DISEASES
54097  |  FAM3B  |  2.443  |  DISEASES
2199  |  FBLN2  |  3.31  |  DISEASES
2626  |  GATA4  |  4.687  |  DISEASES
54826  |  GIN1  |  1.067  |  DISEASES
10052  |  GJC1  |  3.508  |  DISEASES
9569  |  GTF2IRD1  |  2.482  |  DISEASES
3055  |  HCK  |  1.191  |  DISEASES
23493  |  HEY2  |  2.817  |  DISEASES
9742  |  IFT140  |  2.662  |  DISEASES
7044  |  LEFTY2  |  3.199  |  DISEASES
3980  |  LIG3  |  1.193  |  DISEASES
3987  |  LIMS1  |  3.929  |  DISEASES
4194  |  MDM4  |  1.468  |  DISEASES
54903  |  MKS1  |  2.566  |  DISEASES
4548  |  MTR  |  1.295  |  DISEASES
4624  |  MYH6  |  1.287  |  DISEASES
4772  |  NFATC1  |  1.902  |  DISEASES
1482  |  NKX2-5  |  4.649  |  DISEASES
7026  |  NR2F2  |  1.877  |  DISEASES
64324  |  NSD1  |  1.531  |  DISEASES
26227  |  PHGDH  |  1.12  |  DISEASES
10654  |  PMVK  |  2.565  |  DISEASES
5781  |  PTPN11  |  2.363  |  DISEASES
5795  |  PTPRJ  |  1.983  |  DISEASES
22827  |  PUF60  |  2.596  |  DISEASES
54101  |  RIPK4  |  2.517  |  DISEASES
6261  |  RYR1  |  1.172  |  DISEASES
23513  |  SCRIB  |  2.567  |  DISEASES
8036  |  SHOC2  |  2.089  |  DISEASES
347734  |  SLC35B2  |  1.604  |  DISEASES
10479  |  SLC9A6  |  2.272  |  DISEASES
9298  |  SNORD31  |  3.359  |  DISEASES
6654  |  SOS1  |  1.189  |  DISEASES
9901  |  SRGAP3  |  2.525  |  DISEASES
6899  |  TBX1  |  3.489  |  DISEASES
57057  |  TBX20  |  2.293  |  DISEASES
84260  |  TCHP  |  1.559  |  DISEASES
7021  |  TFAP2B  |  2.114  |  DISEASES
340061  |  TMEM173  |  2.314  |  DISEASES
23414  |  ZFPM2  |  3.076  |  DISEASES
7625  |  ZNF74  |  3.241  |  DISEASES
Locus(Waiting for update.)
Disease ID 1254
Disease atrioventricular septal defect
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:6)
HP:0001635  |  Congestive heart failure
HP:0000961  |  Cyanosis
HP:0011622  |  Inlet ventricular septal defect
HP:0002092  |  Pulmonary artery hypertension
HP:0010445  |  Septum primum defect
HP:0011705  |  First degree atrioventricular block
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:16)
Disease ID 1254
Disease atrioventricular septal defect
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:0)
(Waiting for update.)
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:5)
HP ID HP Name MP ID MP Name Annotation
HP:0011622Inlet ventricular septal defectMP:0008950ventricular tachycardiaparoxysmal rapid beating of the heart originating in an ectopic focus in the heart ventricle
HP:0011705First degree atrioventricular blockMP:0010519atrioventricular blocka partial or complete obstruction of the impulse that originates in the atria or sinoatrial node from reaching or transmitting through the atrioventricular node to the ventricles
HP:0002092Pulmonary hypertensionMP:0005258ocular hypertensionabnormal elevation of the intraocular pressure
HP:0010445Primum atrial septal defectMP:0010412atrioventricular septal defectdefects in the thin membranous structure between the right atrium and left ventricle that arise from faulty development of the embryonic endocardial cushions; the spectrum ranges from a primum atrial septal defect and cleft mitral valve, known as a partia
HP:0001635Congestive heart failureMP:0011925abnormal heart echocardiography featureany anomaly in echocardiographic representation of systolic and diastolic function, ventricular compliance, valvular function, or interventricular septum features
Mapped by homologous gene(Total Items:6)
HP ID HP Name MP ID MP Name Annotation
HP:0002092Pulmonary hypertensionMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0001635Congestive heart failureMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0011622Inlet ventricular septal defectMP:0013781abnormal mammary gland luminal epithelium morphologyany structural anomaly of the inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective ti
HP:0011705First degree atrioventricular blockMP:0013781abnormal mammary gland luminal epithelium morphologyany structural anomaly of the inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective ti
HP:0010445Primum atrial septal defectMP:0013781abnormal mammary gland luminal epithelium morphologyany structural anomaly of the inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective ti
HP:0000961CyanosisMP:0013781abnormal mammary gland luminal epithelium morphologyany structural anomaly of the inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective ti
Disease ID 1254
Disease atrioventricular septal defect
Case(Waiting for update.)